title: "Meta-analysis of genes"
  subtitle: "Draft, 25-05-2025v6c"
  output:
    html_document:
      toc: true
      toc_float:
        collapsed: false
        smooth_scroll: false
      code_folding: hide
      number_sections: false
      theme: spacelab
  ---
  # MA_HC_Excitadoras_F {- .tabset .tabset-fade .tabset-pills}
  
  
  ```r
  library(dplyr)
  library(knitr)
  library(DT)
  load("/clinicfs/projects/i63/tfm_hipocampo/Metaanalysis_HC/HC/Excitadoras/F/MA_HC_Excitadoras_F.RData")
  ```

ENSG00000011083

Statistics of ENSG00000011083 meta-analisys

kable(sig.genes.df['ENSG00000011083',])
SYMBOL lower_bound logFC upper_bound pvalue QE QEp SE tau2 I2 H2 p.adjust.fdr p.adjust.BY logFDR n.studies infl.same.sign.logFC infl.nstudies sensi.global sensi.specific
ENSG00000011083 SLC6A7 -0.6498787 -0.5765871 -0.5032955 0 0.0303424 0.8617155 0.0373943 0 0 1 0 0 49.85035 2 2 Study43 0.5007604 Study43

Gene information

Forest plot

knitr::include_graphics("/clinicfs/projects/i63/tfm_hipocampo/Metaanalysis_HC/HC/Excitadoras/F/plots/ENSG00000011083_FOREST.png")

Funnel plot

knitr::include_graphics("/clinicfs/projects/i63/tfm_hipocampo/Metaanalysis_HC/HC/Excitadoras/F/plots/ENSG00000011083_FUNNEL.png")

Incluence plot

knitr::include_graphics("/clinicfs/projects/i63/tfm_hipocampo/Metaanalysis_HC/HC/Excitadoras/F/plots/ENSG00000011083_INFLUENCE.png")

ENSG00000054803

Statistics of ENSG00000054803 meta-analisys

kable(sig.genes.df['ENSG00000054803',])
SYMBOL lower_bound logFC upper_bound pvalue QE QEp SE tau2 I2 H2 p.adjust.fdr p.adjust.BY logFDR n.studies infl.same.sign.logFC infl.nstudies sensi.global sensi.specific
ENSG00000054803 CBLN4 -0.3565155 -0.3123571 -0.2681988 0 0.8764158 0.3491852 0.0225302 0 0 1 0 0 40.12973 2 1 Study43 0.5024222 Study43

Gene information

Forest plot

knitr::include_graphics("/clinicfs/projects/i63/tfm_hipocampo/Metaanalysis_HC/HC/Excitadoras/F/plots/ENSG00000054803_FOREST.png")

Funnel plot

knitr::include_graphics("/clinicfs/projects/i63/tfm_hipocampo/Metaanalysis_HC/HC/Excitadoras/F/plots/ENSG00000054803_FUNNEL.png")

Incluence plot

knitr::include_graphics("/clinicfs/projects/i63/tfm_hipocampo/Metaanalysis_HC/HC/Excitadoras/F/plots/ENSG00000054803_INFLUENCE.png")

ENSG00000070729

Statistics of ENSG00000070729 meta-analisys

kable(sig.genes.df['ENSG00000070729',])
SYMBOL lower_bound logFC upper_bound pvalue QE QEp SE tau2 I2 H2 p.adjust.fdr p.adjust.BY logFDR n.studies infl.same.sign.logFC infl.nstudies sensi.global sensi.specific
ENSG00000070729 CNGB1 1.572374 1.741455 1.910535 0 0.9681705 0.3251369 0.0862671 0 0 1 0 0 86.26479 2 2 Study43 0.5118424 Study43

Gene information

Forest plot

knitr::include_graphics("/clinicfs/projects/i63/tfm_hipocampo/Metaanalysis_HC/HC/Excitadoras/F/plots/ENSG00000070729_FOREST.png")

Funnel plot

knitr::include_graphics("/clinicfs/projects/i63/tfm_hipocampo/Metaanalysis_HC/HC/Excitadoras/F/plots/ENSG00000070729_FUNNEL.png")

Incluence plot

knitr::include_graphics("/clinicfs/projects/i63/tfm_hipocampo/Metaanalysis_HC/HC/Excitadoras/F/plots/ENSG00000070729_INFLUENCE.png")

ENSG00000105339

Statistics of ENSG00000105339 meta-analisys

kable(sig.genes.df['ENSG00000105339',])
SYMBOL lower_bound logFC upper_bound pvalue QE QEp SE tau2 I2 H2 p.adjust.fdr p.adjust.BY logFDR n.studies infl.same.sign.logFC infl.nstudies sensi.global sensi.specific
ENSG00000105339 DENND3 -1.048964 -0.9304216 -0.811879 0 0.067819 0.966659 0.0604821 0 0 1 0 0 49.68336 3 3 Study43 0.4364518 all.p.values < 0.05

Gene information

Forest plot

knitr::include_graphics("/clinicfs/projects/i63/tfm_hipocampo/Metaanalysis_HC/HC/Excitadoras/F/plots/ENSG00000105339_FOREST.png")

Funnel plot

knitr::include_graphics("/clinicfs/projects/i63/tfm_hipocampo/Metaanalysis_HC/HC/Excitadoras/F/plots/ENSG00000105339_FUNNEL.png")

Incluence plot

knitr::include_graphics("/clinicfs/projects/i63/tfm_hipocampo/Metaanalysis_HC/HC/Excitadoras/F/plots/ENSG00000105339_INFLUENCE.png")

ENSG00000117707

Statistics of ENSG00000117707 meta-analisys

kable(sig.genes.df['ENSG00000117707',])
SYMBOL lower_bound logFC upper_bound pvalue QE QEp SE tau2 I2 H2 p.adjust.fdr p.adjust.BY logFDR n.studies infl.same.sign.logFC infl.nstudies sensi.global sensi.specific
ENSG00000117707 PROX1 0.8270834 0.9412668 1.05545 0 0.8143646 0.366833 0.0582579 0 0 1 0 0 54.84216 2 2 Study43 0.5145997 all.p.values < 0.05

Gene information

Forest plot

knitr::include_graphics("/clinicfs/projects/i63/tfm_hipocampo/Metaanalysis_HC/HC/Excitadoras/F/plots/ENSG00000117707_FOREST.png")

Funnel plot

knitr::include_graphics("/clinicfs/projects/i63/tfm_hipocampo/Metaanalysis_HC/HC/Excitadoras/F/plots/ENSG00000117707_FUNNEL.png")

Incluence plot

knitr::include_graphics("/clinicfs/projects/i63/tfm_hipocampo/Metaanalysis_HC/HC/Excitadoras/F/plots/ENSG00000117707_INFLUENCE.png")

ENSG00000128564

Statistics of ENSG00000128564 meta-analisys

kable(sig.genes.df['ENSG00000128564',])
SYMBOL lower_bound logFC upper_bound pvalue QE QEp SE tau2 I2 H2 p.adjust.fdr p.adjust.BY logFDR n.studies infl.same.sign.logFC infl.nstudies sensi.global sensi.specific
ENSG00000128564 VGF -0.4740472 -0.4209735 -0.3678998 0 0.1475378 0.7008995 0.0270789 0 0 1 0 0 50.66699 2 2 Study43 0.5014015 Study43

Gene information

Forest plot

knitr::include_graphics("/clinicfs/projects/i63/tfm_hipocampo/Metaanalysis_HC/HC/Excitadoras/F/plots/ENSG00000128564_FOREST.png")

Funnel plot

knitr::include_graphics("/clinicfs/projects/i63/tfm_hipocampo/Metaanalysis_HC/HC/Excitadoras/F/plots/ENSG00000128564_FUNNEL.png")

Incluence plot

knitr::include_graphics("/clinicfs/projects/i63/tfm_hipocampo/Metaanalysis_HC/HC/Excitadoras/F/plots/ENSG00000128564_INFLUENCE.png")

ENSG00000130962

Statistics of ENSG00000130962 meta-analisys

kable(sig.genes.df['ENSG00000130962',])
SYMBOL lower_bound logFC upper_bound pvalue QE QEp SE tau2 I2 H2 p.adjust.fdr p.adjust.BY logFDR n.studies infl.same.sign.logFC infl.nstudies sensi.global sensi.specific
ENSG00000130962 PRRG1 -0.5235832 -0.4744203 -0.4252574 0 0.9231705 0.3366439 0.0250836 0 0 1 0 0 75.6484 2 2 Study43 0.5045986 Study43

Gene information

Forest plot

knitr::include_graphics("/clinicfs/projects/i63/tfm_hipocampo/Metaanalysis_HC/HC/Excitadoras/F/plots/ENSG00000130962_FOREST.png")

Funnel plot

knitr::include_graphics("/clinicfs/projects/i63/tfm_hipocampo/Metaanalysis_HC/HC/Excitadoras/F/plots/ENSG00000130962_FUNNEL.png")

Incluence plot

knitr::include_graphics("/clinicfs/projects/i63/tfm_hipocampo/Metaanalysis_HC/HC/Excitadoras/F/plots/ENSG00000130962_INFLUENCE.png")

ENSG00000134107

Statistics of ENSG00000134107 meta-analisys

kable(sig.genes.df['ENSG00000134107',])
SYMBOL lower_bound logFC upper_bound pvalue QE QEp SE tau2 I2 H2 p.adjust.fdr p.adjust.BY logFDR n.studies infl.same.sign.logFC infl.nstudies sensi.global sensi.specific
ENSG00000134107 BHLHE40 -0.6183704 -0.5449062 -0.4714421 0 1.313019 0.5186586 0.0374824 0 0 1 0 0 44.22593 3 3 Study43 0.4265538 all.p.values < 0.05

Gene information

Forest plot

knitr::include_graphics("/clinicfs/projects/i63/tfm_hipocampo/Metaanalysis_HC/HC/Excitadoras/F/plots/ENSG00000134107_FOREST.png")

Funnel plot

knitr::include_graphics("/clinicfs/projects/i63/tfm_hipocampo/Metaanalysis_HC/HC/Excitadoras/F/plots/ENSG00000134107_FUNNEL.png")

Incluence plot

knitr::include_graphics("/clinicfs/projects/i63/tfm_hipocampo/Metaanalysis_HC/HC/Excitadoras/F/plots/ENSG00000134107_INFLUENCE.png")

ENSG00000138780

Statistics of ENSG00000138780 meta-analisys

kable(sig.genes.df['ENSG00000138780',])
SYMBOL lower_bound logFC upper_bound pvalue QE QEp SE tau2 I2 H2 p.adjust.fdr p.adjust.BY logFDR n.studies infl.same.sign.logFC infl.nstudies sensi.global sensi.specific
ENSG00000138780 GSTCD -0.5455971 -0.4878161 -0.4300352 0 1.814845 0.4035631 0.0294806 0 0 1 0 0 57.51367 3 3 Study43,syn52293442_hc 0.3173154 Study43

Gene information

Forest plot

knitr::include_graphics("/clinicfs/projects/i63/tfm_hipocampo/Metaanalysis_HC/HC/Excitadoras/F/plots/ENSG00000138780_FOREST.png")

Funnel plot

knitr::include_graphics("/clinicfs/projects/i63/tfm_hipocampo/Metaanalysis_HC/HC/Excitadoras/F/plots/ENSG00000138780_FUNNEL.png")

Incluence plot

knitr::include_graphics("/clinicfs/projects/i63/tfm_hipocampo/Metaanalysis_HC/HC/Excitadoras/F/plots/ENSG00000138780_INFLUENCE.png")

ENSG00000141522

Statistics of ENSG00000141522 meta-analisys

kable(sig.genes.df['ENSG00000141522',])
SYMBOL lower_bound logFC upper_bound pvalue QE QEp SE tau2 I2 H2 p.adjust.fdr p.adjust.BY logFDR n.studies infl.same.sign.logFC infl.nstudies sensi.global sensi.specific
ENSG00000141522 ARHGDIA -0.3260614 -0.283986 -0.2419107 0 0.6480517 0.7232315 0.0214674 0 0 1 0 0 36.41811 3 3 Study43 0.4260803 Study43

Gene information

Forest plot

knitr::include_graphics("/clinicfs/projects/i63/tfm_hipocampo/Metaanalysis_HC/HC/Excitadoras/F/plots/ENSG00000141522_FOREST.png")

Funnel plot

knitr::include_graphics("/clinicfs/projects/i63/tfm_hipocampo/Metaanalysis_HC/HC/Excitadoras/F/plots/ENSG00000141522_FUNNEL.png")

Incluence plot

knitr::include_graphics("/clinicfs/projects/i63/tfm_hipocampo/Metaanalysis_HC/HC/Excitadoras/F/plots/ENSG00000141522_INFLUENCE.png")

ENSG00000143933

Statistics of ENSG00000143933 meta-analisys

kable(sig.genes.df['ENSG00000143933',])
SYMBOL lower_bound logFC upper_bound pvalue QE QEp SE tau2 I2 H2 p.adjust.fdr p.adjust.BY logFDR n.studies infl.same.sign.logFC infl.nstudies sensi.global sensi.specific
ENSG00000143933 CALM2 -2.224914 -2.007216 -1.789517 0 0.2700876 0.603273 0.1110726 0 0 1 0 0 68.94253 2 2 Study43 0.5059813 Study43

Gene information

Forest plot

knitr::include_graphics("/clinicfs/projects/i63/tfm_hipocampo/Metaanalysis_HC/HC/Excitadoras/F/plots/ENSG00000143933_FOREST.png")

Funnel plot

knitr::include_graphics("/clinicfs/projects/i63/tfm_hipocampo/Metaanalysis_HC/HC/Excitadoras/F/plots/ENSG00000143933_FUNNEL.png")

Incluence plot

knitr::include_graphics("/clinicfs/projects/i63/tfm_hipocampo/Metaanalysis_HC/HC/Excitadoras/F/plots/ENSG00000143933_INFLUENCE.png")

ENSG00000144834

Statistics of ENSG00000144834 meta-analisys

kable(sig.genes.df['ENSG00000144834',])
SYMBOL lower_bound logFC upper_bound pvalue QE QEp SE tau2 I2 H2 p.adjust.fdr p.adjust.BY logFDR n.studies infl.same.sign.logFC infl.nstudies sensi.global sensi.specific
ENSG00000144834 TAGLN3 -0.8215358 -0.7171161 -0.6126965 0 0.574452 0.4484952 0.0532763 0 0 1 0 0 37.7456 2 2 Study43 0.5050353 Study43

Gene information

Forest plot

knitr::include_graphics("/clinicfs/projects/i63/tfm_hipocampo/Metaanalysis_HC/HC/Excitadoras/F/plots/ENSG00000144834_FOREST.png")

Funnel plot

knitr::include_graphics("/clinicfs/projects/i63/tfm_hipocampo/Metaanalysis_HC/HC/Excitadoras/F/plots/ENSG00000144834_FUNNEL.png")

Incluence plot

knitr::include_graphics("/clinicfs/projects/i63/tfm_hipocampo/Metaanalysis_HC/HC/Excitadoras/F/plots/ENSG00000144834_INFLUENCE.png")

ENSG00000151474

Statistics of ENSG00000151474 meta-analisys

kable(sig.genes.df['ENSG00000151474',])
SYMBOL lower_bound logFC upper_bound pvalue QE QEp SE tau2 I2 H2 p.adjust.fdr p.adjust.BY logFDR n.studies infl.same.sign.logFC infl.nstudies sensi.global sensi.specific
ENSG00000151474 FRMD4A 0.5473158 0.6068593 0.6664028 0 0.2151348 0.898016 0.0303799 0 0 1 0 0 84.54406 3 3 Study43 0.4725124 all.p.values < 0.05

Gene information

Forest plot

knitr::include_graphics("/clinicfs/projects/i63/tfm_hipocampo/Metaanalysis_HC/HC/Excitadoras/F/plots/ENSG00000151474_FOREST.png")

Funnel plot

knitr::include_graphics("/clinicfs/projects/i63/tfm_hipocampo/Metaanalysis_HC/HC/Excitadoras/F/plots/ENSG00000151474_FUNNEL.png")

Incluence plot

knitr::include_graphics("/clinicfs/projects/i63/tfm_hipocampo/Metaanalysis_HC/HC/Excitadoras/F/plots/ENSG00000151474_INFLUENCE.png")

ENSG00000167702

Statistics of ENSG00000167702 meta-analisys

kable(sig.genes.df['ENSG00000167702',])
SYMBOL lower_bound logFC upper_bound pvalue QE QEp SE tau2 I2 H2 p.adjust.fdr p.adjust.BY logFDR n.studies infl.same.sign.logFC infl.nstudies sensi.global sensi.specific
ENSG00000167702 KIFC2 -0.4939861 -0.4343287 -0.3746713 0 1.87803 0.3910127 0.030438 0 0 1 0 0 42.59355 3 2 Study43,GSE163577 0.1848826 Study43,GSE163577

Gene information

Forest plot

knitr::include_graphics("/clinicfs/projects/i63/tfm_hipocampo/Metaanalysis_HC/HC/Excitadoras/F/plots/ENSG00000167702_FOREST.png")

Funnel plot

knitr::include_graphics("/clinicfs/projects/i63/tfm_hipocampo/Metaanalysis_HC/HC/Excitadoras/F/plots/ENSG00000167702_FUNNEL.png")

Incluence plot

knitr::include_graphics("/clinicfs/projects/i63/tfm_hipocampo/Metaanalysis_HC/HC/Excitadoras/F/plots/ENSG00000167702_INFLUENCE.png")

ENSG00000168032

Statistics of ENSG00000168032 meta-analisys

kable(sig.genes.df['ENSG00000168032',])
SYMBOL lower_bound logFC upper_bound pvalue QE QEp SE tau2 I2 H2 p.adjust.fdr p.adjust.BY logFDR n.studies infl.same.sign.logFC infl.nstudies sensi.global sensi.specific
ENSG00000168032 ENTPD3 -0.447647 -0.3965205 -0.3453939 0 0.05043 0.8223167 0.0260854 0 0 1 0 0 48.49774 2 2 Study43 0.5007027 Study43

Gene information

Forest plot

knitr::include_graphics("/clinicfs/projects/i63/tfm_hipocampo/Metaanalysis_HC/HC/Excitadoras/F/plots/ENSG00000168032_FOREST.png")

Funnel plot

knitr::include_graphics("/clinicfs/projects/i63/tfm_hipocampo/Metaanalysis_HC/HC/Excitadoras/F/plots/ENSG00000168032_FUNNEL.png")

Incluence plot

knitr::include_graphics("/clinicfs/projects/i63/tfm_hipocampo/Metaanalysis_HC/HC/Excitadoras/F/plots/ENSG00000168032_INFLUENCE.png")

ENSG00000175426

Statistics of ENSG00000175426 meta-analisys

kable(sig.genes.df['ENSG00000175426',])
SYMBOL lower_bound logFC upper_bound pvalue QE QEp SE tau2 I2 H2 p.adjust.fdr p.adjust.BY logFDR n.studies infl.same.sign.logFC infl.nstudies sensi.global sensi.specific
ENSG00000175426 PCSK1 -0.9303448 -0.8610288 -0.7917127 0 0.4933008 0.4824586 0.035366 0 0 1 0 0 126.0916 2 2 Study43 0.5012013 Study43

Gene information

Forest plot

knitr::include_graphics("/clinicfs/projects/i63/tfm_hipocampo/Metaanalysis_HC/HC/Excitadoras/F/plots/ENSG00000175426_FOREST.png")

Funnel plot

knitr::include_graphics("/clinicfs/projects/i63/tfm_hipocampo/Metaanalysis_HC/HC/Excitadoras/F/plots/ENSG00000175426_FUNNEL.png")

Incluence plot

knitr::include_graphics("/clinicfs/projects/i63/tfm_hipocampo/Metaanalysis_HC/HC/Excitadoras/F/plots/ENSG00000175426_INFLUENCE.png")

ENSG00000178764

Statistics of ENSG00000178764 meta-analisys

kable(sig.genes.df['ENSG00000178764',])
SYMBOL lower_bound logFC upper_bound pvalue QE QEp SE tau2 I2 H2 p.adjust.fdr p.adjust.BY logFDR n.studies infl.same.sign.logFC infl.nstudies sensi.global sensi.specific
ENSG00000178764 ZHX2 0.6282233 0.7147249 0.8012265 0 0.867849 0.6479612 0.0441343 0 0 1 0 0 55.05493 3 3 Study43 0.4304125 all.p.values < 0.05

Gene information

Forest plot

knitr::include_graphics("/clinicfs/projects/i63/tfm_hipocampo/Metaanalysis_HC/HC/Excitadoras/F/plots/ENSG00000178764_FOREST.png")

Funnel plot

knitr::include_graphics("/clinicfs/projects/i63/tfm_hipocampo/Metaanalysis_HC/HC/Excitadoras/F/plots/ENSG00000178764_FUNNEL.png")

Incluence plot

knitr::include_graphics("/clinicfs/projects/i63/tfm_hipocampo/Metaanalysis_HC/HC/Excitadoras/F/plots/ENSG00000178764_INFLUENCE.png")

ENSG00000188229

Statistics of ENSG00000188229 meta-analisys

kable(sig.genes.df['ENSG00000188229',])
SYMBOL lower_bound logFC upper_bound pvalue QE QEp SE tau2 I2 H2 p.adjust.fdr p.adjust.BY logFDR n.studies infl.same.sign.logFC infl.nstudies sensi.global sensi.specific
ENSG00000188229 TUBB4B -0.3998176 -0.3546425 -0.3094674 0 0.665253 0.717038 0.0230489 0 0 1 0 0 49.68336 3 3 Study43 0.4280143 Study43

Gene information

Forest plot

knitr::include_graphics("/clinicfs/projects/i63/tfm_hipocampo/Metaanalysis_HC/HC/Excitadoras/F/plots/ENSG00000188229_FOREST.png")

Funnel plot

knitr::include_graphics("/clinicfs/projects/i63/tfm_hipocampo/Metaanalysis_HC/HC/Excitadoras/F/plots/ENSG00000188229_FUNNEL.png")

Incluence plot

knitr::include_graphics("/clinicfs/projects/i63/tfm_hipocampo/Metaanalysis_HC/HC/Excitadoras/F/plots/ENSG00000188229_INFLUENCE.png")

ENSG00000188730

Statistics of ENSG00000188730 meta-analisys

kable(sig.genes.df['ENSG00000188730',])
SYMBOL lower_bound logFC upper_bound pvalue QE QEp SE tau2 I2 H2 p.adjust.fdr p.adjust.BY logFDR n.studies infl.same.sign.logFC infl.nstudies sensi.global sensi.specific
ENSG00000188730 VWC2 -0.7180604 -0.6602811 -0.6025017 0 0.607224 0.4358349 0.0294798 0 0 1 0 0 106.5785 2 2 Study43 0.5037138 Study43

Gene information

Forest plot

knitr::include_graphics("/clinicfs/projects/i63/tfm_hipocampo/Metaanalysis_HC/HC/Excitadoras/F/plots/ENSG00000188730_FOREST.png")

Funnel plot

knitr::include_graphics("/clinicfs/projects/i63/tfm_hipocampo/Metaanalysis_HC/HC/Excitadoras/F/plots/ENSG00000188730_FUNNEL.png")

Incluence plot

knitr::include_graphics("/clinicfs/projects/i63/tfm_hipocampo/Metaanalysis_HC/HC/Excitadoras/F/plots/ENSG00000188730_INFLUENCE.png")

ENSG00000204071

Statistics of ENSG00000204071 meta-analisys

kable(sig.genes.df['ENSG00000204071',])
SYMBOL lower_bound logFC upper_bound pvalue QE QEp SE tau2 I2 H2 p.adjust.fdr p.adjust.BY logFDR n.studies infl.same.sign.logFC infl.nstudies sensi.global sensi.specific
ENSG00000204071 TCEAL6 -0.4965898 -0.4370494 -0.3775091 0 0.0119006 0.9131312 0.0303783 0 0 1 0 0 43.30261 2 2 Study43 0.5012971 Study43

Gene information

Forest plot

knitr::include_graphics("/clinicfs/projects/i63/tfm_hipocampo/Metaanalysis_HC/HC/Excitadoras/F/plots/ENSG00000204071_FOREST.png")

Funnel plot

knitr::include_graphics("/clinicfs/projects/i63/tfm_hipocampo/Metaanalysis_HC/HC/Excitadoras/F/plots/ENSG00000204071_FUNNEL.png")

Incluence plot

knitr::include_graphics("/clinicfs/projects/i63/tfm_hipocampo/Metaanalysis_HC/HC/Excitadoras/F/plots/ENSG00000204071_INFLUENCE.png")

sessionInfo

date()
## [1] "Sun May 25 16:04:17 2025"
sessionInfo()
## R version 4.2.2 (2022-10-31)
## Platform: x86_64-pc-linux-gnu (64-bit)
## Running under: CentOS Linux 7 (Core)
## 
## Matrix products: default
## BLAS/LAPACK: /opt/sci-soft/software/FlexiBLAS/3.0.4-GCC-11.2.0/lib64/libflexiblas.so.3.0
## 
## locale:
##  [1] LC_CTYPE=en_US.UTF-8       LC_NUMERIC=C               LC_TIME=en_US.UTF-8        LC_COLLATE=en_US.UTF-8    
##  [5] LC_MONETARY=en_US.UTF-8    LC_MESSAGES=en_US.UTF-8    LC_PAPER=en_US.UTF-8       LC_NAME=C                 
##  [9] LC_ADDRESS=C               LC_TELEPHONE=C             LC_MEASUREMENT=en_US.UTF-8 LC_IDENTIFICATION=C       
## 
## attached base packages:
## [1] stats     graphics  grDevices utils     datasets  methods   base     
## 
## other attached packages:
##  [1] plotly_4.10.4       DT_0.26             knitr_1.41          ggplot2_3.5.2       dplyr_1.0.10        limma_3.54.0       
##  [7] tibble_3.1.8        metafor_3.8-1       metadat_1.2-0       Matrix_1.5-3        Biobase_2.58.0      BiocGenerics_0.44.0
## 
## loaded via a namespace (and not attached):
##  [1] tidyselect_1.2.0   xfun_0.35          bslib_0.4.2        purrr_0.3.5        lattice_0.20-45    vctrs_0.6.5       
##  [7] generics_0.1.3     htmltools_0.5.4    viridisLite_0.4.1  yaml_2.3.6         utf8_1.2.2         rlang_1.1.6       
## [13] pillar_1.8.1       jquerylib_0.1.4    glue_1.6.2         withr_2.5.0        DBI_1.1.3          RColorBrewer_1.1-3
## [19] lifecycle_1.0.3    stringr_1.5.0      gtable_0.3.1       htmlwidgets_1.6.0  evaluate_0.19      labeling_0.4.2    
## [25] fastmap_1.1.0      crosstalk_1.2.0    fansi_1.0.3        highr_0.9          scales_1.4.0       cachem_1.0.6      
## [31] jsonlite_1.8.4     farver_2.1.1       png_0.1-8          digest_0.6.31      stringi_1.7.8      grid_4.2.2        
## [37] mathjaxr_1.6-0     cli_3.4.1          tools_4.2.2        magrittr_2.0.3     sass_0.4.4         lazyeval_0.2.2    
## [43] dichromat_2.0-0.1  tidyr_1.2.1        pkgconfig_2.0.3    ellipsis_0.3.2     data.table_1.14.6  assertthat_0.2.1  
## [49] rmarkdown_2.19     httr_1.4.4         rstudioapi_0.14    R6_2.5.1           nlme_3.1-161       compiler_4.2.2